Transcript: THAP7-AS1:2

Basic information

LNCipedia transcript ID: THAP7-AS1:2 
HGNC Gene Symbol: THAP7-AS1    
HGNC Full Gene Name: THAP7 antisense RNA 1
Ensembl Gene ID: ENSG00000230513
Ensembl Transcript ID: ENST00000429962
RefSeq ID: NR_027052
Location (hg38): chr22:21001922-21003272
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1263 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000429962.1; THAP7-AS1-003; OTTHUMT00000320386.1; NONHSAT083617; NR_027052; NR_027052.1
Alternative gene names: ENSG00000230513.1; THAP7-AS1; OTTHUMG00000150877.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 253.9931 coding 
CPAT coding probability 51.05% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
THAP7-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LZTR1-1:2
4.0 THAP7-AS1:2
4.1 THAP7-AS1:2
5.0 THAP7-AS1:2
5.1 THAP7-AS1:2
5.2 THAP7-AS1:2