Transcript: THAP7-AS1:4

Basic information

LNCipedia transcript ID: THAP7-AS1:4 
HGNC Gene Symbol: THAP7-AS1    
HGNC Full Gene Name: THAP7 antisense RNA 1
Ensembl Gene ID: ENSG00000230513
Ensembl Transcript ID: ENST00000452284
Location (hg38): chr22:21002208-21010342
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2298 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000452284.1; THAP7-AS1-002; OTTHUMT00000320385.1
Alternative gene names: ENSG00000230513.1; THAP7-AS1; OTTHUMG00000150877.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 162.6284 coding 
CPAT coding probability 14.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
THAP7-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LZTR1-1:3
4.0 THAP7-AS1:4
4.1 THAP7-AS1:4
5.0 THAP7-AS1:4
5.1 THAP7-AS1:4
5.2 THAP7-AS1:4