Transcript: THAP9-AS1:21

Basic information

LNCipedia transcript ID: THAP9-AS1:21 
LNCipedia gene ID: THAP9-AS1
Location (hg38): chr4:82877489-82891178
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 682 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT097181
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 727.7931 coding 
CPAT coding probability 14.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
THAP9-AS1:21 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LIN54-1:21
4.0 THAP9-AS1:21
4.1 THAP9-AS1:21
5.0 THAP9-AS1:21
5.1 THAP9-AS1:21
5.2 THAP9-AS1:21