Transcript: TIPARP-AS1:1

Basic information

LNCipedia transcript ID: TIPARP-AS1:1 
LNCipedia gene ID: TIPARP-AS1
Location (hg38): chr3:156671802-156675879
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2002 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT092857
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -144.7562 non-coding 
CPAT coding probability 5.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TIPARP-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SSR3-2:4
4.0 TIPARP-AS1:1
4.1 TIPARP-AS1:1
5.0 TIPARP-AS1:1
5.1 TIPARP-AS1:1
5.2 TIPARP-AS1:1