Transcript: TIPARP-AS1:11

Basic information

LNCipedia transcript ID: TIPARP-AS1:11 
LNCipedia gene ID: TIPARP-AS1
Location (hg38): chr3:156671864-156674379
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1000 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000243926.1|ENST00000478005.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -242.348 non-coding 
CPAT coding probability 0.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TIPARP-AS1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 TIPARP-AS1:11
5.0 TIPARP-AS1:11
5.1 TIPARP-AS1:11
5.2 TIPARP-AS1:11