Transcript: TIPARP-AS1:12

Basic information

LNCipedia transcript ID: TIPARP-AS1:12 
LNCipedia gene ID: TIPARP-AS1
Location (hg38): chr3:156669434-156674379
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3074 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000243926.1|HBMT00001014156.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.3818 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TIPARP-AS1:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 TIPARP-AS1:12
5.0 TIPARP-AS1:12
5.1 TIPARP-AS1:12
5.2 TIPARP-AS1:12