Transcript: TIPARP-AS1:7

Basic information

LNCipedia transcript ID: TIPARP-AS1:7 
HGNC Gene Symbol: TIPARP-AS1    
HGNC Full Gene Name: TIPARP antisense RNA 1
Ensembl Gene ID: ENSG00000243926
Ensembl Transcript ID: ENST00000463449
Location (hg38): chr3:156671922-156672870
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 735 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000463449.1; TIPARP-AS1-002; OTTHUMT00000351612.1; NONHSAT092860
Alternative gene names: ENSG00000243926.1; TIPARP-AS1; OTTHUMG00000158643.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -73.2139 non-coding 
CPAT coding probability 0.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TIPARP-AS1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SSR3-2:3
4.0 TIPARP-AS1:7
4.1 TIPARP-AS1:7
5.0 TIPARP-AS1:7
5.1 TIPARP-AS1:7
5.2 TIPARP-AS1:7