Transcript: TLR8-AS1:1

Basic information

LNCipedia transcript ID: TLR8-AS1:1 
LNCipedia gene ID: TLR8-AS1
RefSeq ID: NR_030727
Location (hg38): chrX:12902817-12943300
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1589 bp
Exons: 5
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT136273; NR_030727; NR_030727.1
Alternative gene names: ; TLR8-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.6409 non-coding 
CPAT coding probability 7.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TLR8-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM9C-1:2
4.0 TLR8-AS1:1
4.1 TLR8-AS1:1
5.0 TLR8-AS1:1
5.1 TLR8-AS1:1
5.2 TLR8-AS1:1