Transcript: TMC3-AS1:13

Basic information

LNCipedia transcript ID: TMC3-AS1:13 
LNCipedia gene ID: TMC3-AS1
Location (hg38): chr15:81393625-81394082
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 458 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016
Alternative transcript names: ENST00000612811.1
Alternative gene names: ENSG00000278448.1; CTD-2240J17.3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -106.966 non-coding 
CPAT coding probability 0.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TMC3-AS1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-IL16-10:1
4.1 TMC3-AS1:13
5.0 TMC3-AS1:13
5.1 TMC3-AS1:13
5.2 TMC3-AS1:13