Transcript: TMCC1-AS1:4

Basic information

LNCipedia transcript ID: TMCC1-AS1:4 
LNCipedia gene ID: TMCC1-AS1
Location (hg38): chr3:129893872-129906312
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1502 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT092082
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 40.1048 non-coding 
CPAT coding probability 67.39% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
TMCC1-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRH-6:4
4.0 TMCC1-AS1:4
4.1 TMCC1-AS1:4
5.0 TMCC1-AS1:4
5.1 TMCC1-AS1:4
5.2 TMCC1-AS1:4