Transcript: TMCC1-AS1:8

Basic information

LNCipedia transcript ID: TMCC1-AS1:8 
LNCipedia gene ID: TMCC1-AS1
Location (hg38): chr3:129893865-129909436
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 7793 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000271270.1|MICT00000250430.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 40.1048 non-coding 
CPAT coding probability 85.06% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
TMCC1-AS1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 TMCC1-AS1:8
5.0 TMCC1-AS1:8
5.1 TMCC1-AS1:8
5.2 TMCC1-AS1:8