Transcript: TMEM108-AS1:2

Basic information

LNCipedia transcript ID: TMEM108-AS1:2 
LNCipedia gene ID: TMEM108-AS1
RefSeq ID: NR_110812
Location (hg38): chr3:133246448-133257121
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2338 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110812; NR_110812.1
Alternative gene names: ; TMEM108-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -3.5389 non-coding 
CPAT coding probability 0.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TMEM108-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TOPBP1-2:3
4.0 TMEM108-AS1:2
4.1 TMEM108-AS1:2
5.0 TMEM108-AS1:2
5.1 TMEM108-AS1:2
5.2 TMEM108-AS1:2