Transcript: TMEM132D-AS1:27

Basic information

LNCipedia transcript ID: TMEM132D-AS1:27 
LNCipedia gene ID: TMEM132D-AS1
Location (hg38): chr12:129109695-129113294
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 293 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000510001; ENST00000510001.2; RP11-669N7.2-005; OTTHUMT00000399596.1
Alternative gene names: ENSG00000249196; RP11-669N7.2; ENSG00000249196.2; OTTHUMG00000168401.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.0373 non-coding 
CPAT coding probability 1.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TMEM132D-AS1:27 yes no no no

Available literature

  1. Miao (2017), The Effect of Botulinum Toxin Type A on Expression Profiling of Long Noncoding RNAs in Human Dermal Fibroblasts., Biomed Res Int


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GLT1D1-1:6
3.1 lnc-GLT1D1-1:5
4.0 lnc-GLT1D1-1:5
4.1 lnc-GLT1D1-1:5
5.0 lnc-GLT1D1-1:5
5.1 TMEM132D-AS1:11
5.2 TMEM132D-AS1:27