Transcript: TMEM147-AS1:3

Basic information

LNCipedia transcript ID: TMEM147-AS1:3 
HGNC Gene Symbol: TMEM147-AS1    
HGNC Full Gene Name: TMEM147 antisense RNA 1
Ensembl Gene ID: ENSG00000236144
Ensembl Transcript ID: ENST00000588286
Location (hg38): chr19:35541582-35545492
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3911 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT065869; ENST00000588286.1
Alternative gene names: ENSG00000236144.2; AD000090.2; ENSG00000236144.6; TMEM147-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 517.9022 coding 
CPAT coding probability 20.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
TMEM147-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATP4A-1:3
4.0 TMEM147-AS1:3
4.1 TMEM147-AS1:3
5.0 TMEM147-AS1:3
5.1 TMEM147-AS1:3
5.2 TMEM147-AS1:3