Transcript: TMEM161B-AS1:46
Basic information
LNCipedia transcript ID: TMEM161B-AS1:46
HGNC Gene Symbol: TMEM161B-AS1
HGNC Full Gene Name:
TMEM161B antisense RNA 1
Ensembl Gene ID:
ENSG00000247828
Ensembl Transcript ID:
ENST00000508015
Location (hg38): chr5:88392195-88417491
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 575 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00009446; ENST00000508015; ENST00000508015.1; TMEM161B-AS1-008; OTTHUMT00000370148.1; NONHSAT102651
Alternative gene names: XLOC_004459; linc-POLR3G-8; ENSG00000247828; CTC-358I24.1; ENSG00000247828.2; TMEM161B-AS1; OTTHUMG00000162704.3; ENSG00000247828.3; ENSG00000247828.7
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
Locus conservation? | ||||
---|---|---|---|---|
TMEM161B-AS1:46 | no | no | no | no |
Available literature
- Ellinger (2015), The long non-coding RNA lnc-ZNF180-2 is a prognostic biomarker in patients with clear cell renal cell carcinoma., Am J Cancer Res
- Sun (2014), Computational evidence of NAGNAG alternative splicing in human large intergenic noncoding RNA., Biomed Res Int
- Cabili (2011), Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses., Genes Dev.
- Chodroff (2010), Long noncoding RNA genes: conservation of sequence and brain expression among diverse amniotes., Genome Biol.
LNCipedia transcript ID history
LNCipedia version | LNCipedia transcript ID |
---|---|
1.3 | lnc-RASA1-3:24 |
3.1 | lnc-RASA1-3:24 |
4.0 | TMEM161B-AS1:46 |
4.1 | TMEM161B-AS1:46 |
5.0 | TMEM161B-AS1:46 |
5.1 | TMEM161B-AS1:46 |
5.2 | TMEM161B-AS1:46 |