Transcript: TMEM202-AS1:22

Basic information

LNCipedia transcript ID: TMEM202-AS1:22 
HGNC Gene Symbol: TMEM202-AS1    
HGNC Full Gene Name: TMEM202 antisense RNA 1
Ensembl Gene ID: ENSG00000261423
Ensembl Transcript ID: ENST00000565181
Location (hg38): chr15:72472844-72475168
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2325 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000565181.1; RP11-1007O24.3-001; OTTHUMT00000421959.1; NONHSAT047098
Alternative gene names: ENSG00000261423.1; RP11-1007O24.3; OTTHUMG00000173055.1; TMEM202-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 59.3075 non-coding 
CPAT coding probability 94.72% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
TMEM202-AS1:22 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HEXA-3:1
4.0 lnc-HEXA-3:1
4.1 lnc-HEXA-3:1
5.0 lnc-HEXA-3:1
5.1 TMEM202-AS1:2
5.2 TMEM202-AS1:22