Transcript: TMEM202-AS1:30

Basic information

LNCipedia transcript ID: TMEM202-AS1:30 
HGNC Gene Symbol: TMEM202-AS1    
HGNC Full Gene Name: TMEM202 antisense RNA 1
Ensembl Gene ID: ENSG00000261423
Ensembl Transcript ID: ENST00000562573
Location (hg38): chr15:72407778-72474209
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 723 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000562573.1; RP11-1007O24.3-002; OTTHUMT00000421958.1; NONHSAT047090
Alternative gene names: ENSG00000261423.1; RP11-1007O24.3; OTTHUMG00000173055.1; TMEM202-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -86.7315 non-coding 
CPAT coding probability 5.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TMEM202-AS1:30 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HEXA-3:3
4.0 lnc-HEXA-3:3
4.1 lnc-HEXA-3:3
5.0 lnc-HEXA-3:3
5.1 TMEM202-AS1:11
5.2 TMEM202-AS1:30