Transcript: TMEM202-AS1:38

Basic information

LNCipedia transcript ID: TMEM202-AS1:38 
LNCipedia gene ID: TMEM202-AS1
Ensembl Gene ID: ENSG00000261187
Ensembl Transcript ID: ENST00000568345
Location (hg38): chr15:72465128-72466262
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1135 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000568345.1; RP11-1007O24.2-001; OTTHUMT00000421926.1; NONHSAT140246
Alternative gene names: ENSG00000261187.1; RP11-1007O24.2; OTTHUMG00000173048.1; AC079322.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -14.8013 non-coding 
CPAT coding probability 0.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TMEM202-AS1:38 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HEXA-2:1
4.0 lnc-HEXA-2:1
4.1 lnc-HEXA-3:17
5.0 lnc-HEXA-3:17
5.1 TMEM202-AS1:19
5.2 TMEM202-AS1:38