Transcript: TMEM246-AS1:3

Basic information

LNCipedia transcript ID: TMEM246-AS1:3 
LNCipedia gene ID: TMEM246-AS1
RefSeq ID: NR_121576
Location (hg38): chr9:101468439-101481506
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 398 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_121576; NR_121576.1
Alternative gene names: ; TMEM246-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -148.3266 non-coding 
CPAT coding probability 5.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TMEM246-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RNF20-1:11
4.0 TMEM246-AS1:3
4.1 TMEM246-AS1:3
5.0 TMEM246-AS1:3
5.1 TMEM246-AS1:3
5.2 TMEM246-AS1:3