Transcript: TMEM254-AS1:20

Basic information

LNCipedia transcript ID: TMEM254-AS1:20 
LNCipedia gene ID: TMEM254-AS1
Location (hg38): chr10:80047722-80078925
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2202 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000230091.2|ENST00000432070.2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 14.1968 non-coding 
CPAT coding probability 15.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TMEM254-AS1:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 TMEM254-AS1:20
5.0 TMEM254-AS1:20
5.1 TMEM254-AS1:20
5.2 TMEM254-AS1:20