Transcript: TMEM51-AS1:1

Basic information

LNCipedia transcript ID: TMEM51-AS1:1 
LNCipedia gene ID: TMEM51-AS1
Location (hg38): chr1:15115953-15152464
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2962 bp
Exons: 6
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000310916; ENST00000310916.3; C1orf126-001; OTTHUMT00000005695.3; NONHSAT001018
Alternative gene names: ENSG00000175147; C1orf126; ENSG00000175147.7; OTTHUMG00000002043.4; TMEM51-AS1; FLJ23703


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -58.478 non-coding 
CPAT coding probability 18.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TMEM51-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C1orf195-1:1
3.1 lnc-C1orf195-1:1
4.0 TMEM51-AS1:1
4.1 TMEM51-AS1:1
5.0 TMEM51-AS1:1
5.1 TMEM51-AS1:1
5.2 TMEM51-AS1:1