Transcript: TMEM72-AS1:1

Basic information

LNCipedia transcript ID: TMEM72-AS1:1 
LNCipedia gene ID: TMEM72-AS1
Location (hg38): chr10:44811024-44959689
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3302 bp
Exons: 8
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000450287; ENST00000450287.1; TMEM72-AS1-001; OTTHUMT00000047757.1; NONHSAT013042
Alternative gene names: ENSG00000224812; RP11-18M11.2; ENSG00000224812.1; TMEM72-AS1; OTTHUMG00000018062.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.4986 non-coding 
CPAT coding probability 9.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TMEM72-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C10orf10-1:1
3.1 lnc-C10orf10-2:1
4.0 TMEM72-AS1:1
4.1 TMEM72-AS1:1
5.0 TMEM72-AS1:1
5.1 TMEM72-AS1:1
5.2 TMEM72-AS1:1