Transcript: TMEM72-AS1:2

Basic information

LNCipedia transcript ID: TMEM72-AS1:2 
HGNC Gene Symbol: TMEM72-AS1    
HGNC Full Gene Name: TMEM72 antisense RNA 1
Ensembl Gene ID: ENSG00000224812
Ensembl Transcript ID: ENST00000450287
RefSeq ID: NR_033842
Location (hg38): chr10:44811024-44959689
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3300 bp
Exons: 8
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT013041; NR_033842; ENST00000450287.2; NR_033842.1
Alternative gene names: ENSG00000224812.2; TMEM72-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.4986 non-coding 
CPAT coding probability 9.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TMEM72-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf10-2:3
4.0 TMEM72-AS1:2
4.1 TMEM72-AS1:2
5.0 TMEM72-AS1:2
5.1 TMEM72-AS1:2
5.2 TMEM72-AS1:2