Transcript: TMLHE-AS1:1

Basic information

LNCipedia transcript ID: TMLHE-AS1:1 
LNCipedia gene ID: TMLHE-AS1
Location (hg38): chrX:155465970-155467660
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1691 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000541151.1; RP11-954J6.3-201; NONHSAT139237
Alternative gene names: ENSG00000224533.3; RP11-954J6.3; OTTHUMG00000022672.1; TMLHE-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.0401 non-coding 
CPAT coding probability 9.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TMLHE-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-F8A2-2:1
4.0 TMLHE-AS1:1
4.1 TMLHE-AS1:1
5.0 TMLHE-AS1:1
5.1 TMLHE-AS1:1
5.2 TMLHE-AS1:1