Transcript: TMLHE-AS1:2

Basic information

LNCipedia transcript ID: TMLHE-AS1:2 
HGNC Gene Symbol: TMLHE-AS1    
HGNC Full Gene Name: TMLHE antisense RNA 1
Ensembl Gene ID: ENSG00000224533
Ensembl Transcript ID: ENST00000433624
RefSeq ID: NR_039991
Location (hg38): chrX:155466540-155494110
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1702 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000433624.1; RP11-954J6.3-002; OTTHUMT00000058815.1; NONHSAT139238; NR_039991; NR_109985; NR_039991.1
Alternative gene names: ENSG00000224533.3; RP11-954J6.3; OTTHUMG00000022672.1; TMLHE-AS1; ENSG00000224533.4;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -57.5338 non-coding 
CPAT coding probability 1.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TMLHE-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-F8A2-2:2
4.0 TMLHE-AS1:2
4.1 TMLHE-AS1:2
5.0 TMLHE-AS1:2
5.1 TMLHE-AS1:2
5.2 TMLHE-AS1:2