Transcript: TMPO-AS1:12

Basic information

LNCipedia transcript ID: TMPO-AS1:12 
LNCipedia gene ID: TMPO-AS1
Location (hg38): chr12:98515294-98516170
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 698 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000257167.2|ENST00000546421.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TMPO-AS1:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 TMPO-AS1:12
5.0 TMPO-AS1:12
5.1 TMPO-AS1:12
5.2 TMPO-AS1:12