Transcript: TNFRSF14-AS1:30

Basic information

LNCipedia transcript ID: TNFRSF14-AS1:30 
LNCipedia gene ID: TNFRSF14-AS1
Location (hg38): chr1:2549924-2551829
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1269 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT000449
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 34.9052 non-coding 
CPAT coding probability 51.08% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
TNFRSF14-AS1:30 no no no no

Available literature

  1. Zhai (2017), Expression pattern of genome-scale long noncoding RNA following acute myocardial infarction in Chinese Uyghur patients., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HES5-1:14
4.0 lnc-HES5-1:14
4.1 lnc-HES5-1:14
5.0 lnc-HES5-1:14
5.1 TNFRSF14-AS1:15
5.2 TNFRSF14-AS1:30