Transcript: TOB1-AS1:1

Basic information

LNCipedia transcript ID: TOB1-AS1:1 
LNCipedia gene ID: TOB1-AS1
Location (hg38): chr17:50866679-50868271
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1315 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000416263
Alternative gene names: ENSG00000229980; AC091062.2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -437.9411 non-coding 
CPAT coding probability 15.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TOB1-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-WFIKKN2-1:1
3.1 lnc-WFIKKN2-1:2
4.0 TOB1-AS1:1
4.1 TOB1-AS1:1
5.0 TOB1-AS1:1
5.1 TOB1-AS1:1
5.2 TOB1-AS1:1