Transcript: TOB1-AS1:10

Basic information

LNCipedia transcript ID: TOB1-AS1:10 
LNCipedia gene ID: TOB1-AS1
Location (hg38): chr17:50866536-50869628
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2811 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000229980.4|ENCT00000176510.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -3.3826 non-coding 
CPAT coding probability 13.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TOB1-AS1:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 TOB1-AS1:10
5.0 TOB1-AS1:10
5.1 TOB1-AS1:10
5.2 TOB1-AS1:10