Transcript: TOB1-AS1:11

Basic information

LNCipedia transcript ID: TOB1-AS1:11 
LNCipedia gene ID: TOB1-AS1
Location (hg38): chr17:50866621-50868164
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1266 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000229980.4|FTMT26700026847.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -224.5611 non-coding 
CPAT coding probability 8.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TOB1-AS1:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 TOB1-AS1:11
5.0 TOB1-AS1:11
5.1 TOB1-AS1:11
5.2 TOB1-AS1:11