Transcript: TOB1-AS1:12

Basic information

LNCipedia transcript ID: TOB1-AS1:12 
LNCipedia gene ID: TOB1-AS1
Location (hg38): chr17:50866799-50868307
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1231 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000229980.4|ENST00000416263.3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -437.9411 non-coding 
CPAT coding probability 8.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TOB1-AS1:12 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 TOB1-AS1:12
5.0 TOB1-AS1:12
5.1 TOB1-AS1:12
5.2 TOB1-AS1:12