Transcript: TOB1-AS1:6

Basic information

LNCipedia transcript ID: TOB1-AS1:6 
LNCipedia gene ID: TOB1-AS1
Location (hg38): chr17:50866814-50868270
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 977 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT054730
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -437.9411 non-coding 
CPAT coding probability 21.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TOB1-AS1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WFIKKN2-1:7
4.0 TOB1-AS1:6
4.1 TOB1-AS1:6
5.0 TOB1-AS1:6
5.1 TOB1-AS1:6
5.2 TOB1-AS1:6