Transcript: TRG-AS1:4

Basic information

LNCipedia transcript ID: TRG-AS1:4 
LNCipedia gene ID: TRG-AS1
Ensembl Gene ID: ENSG00000281103
Ensembl Transcript ID: ENST00000629576
Location (hg38): chr7:38341577-38342702
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 670 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000629576.1
Alternative gene names: ENSG00000281103.1; TRG-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -28.959 non-coding 
CPAT coding probability 3.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TRG-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 TRG-AS1:4
4.1 TRG-AS1:4
5.0 TRG-AS1:4
5.1 TRG-AS1:4
5.2 TRG-AS1:4