Transcript: TRG-AS1:9

Basic information

LNCipedia transcript ID: TRG-AS1:9 
LNCipedia gene ID: TRG-AS1
Location (hg38): chr7:38331053-38378695
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4232 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000091993.1|FTMT22700011876.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 11.188 non-coding 
CPAT coding probability 2.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TRG-AS1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 TRG-AS1:9
5.0 TRG-AS1:9
5.1 TRG-AS1:9
5.2 TRG-AS1:9