Transcript: TRHDE-AS1:23

Basic information

LNCipedia transcript ID: TRHDE-AS1:23 
LNCipedia gene ID: TRHDE-AS1
Location (hg38): chr12:72253513-72272580
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3020 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000236333.3|ENST00000435350.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -26.7521 non-coding 
CPAT coding probability 20.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TRHDE-AS1:23 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 TRHDE-AS1:23
5.0 TRHDE-AS1:23
5.1 TRHDE-AS1:23
5.2 TRHDE-AS1:23