Transcript: TRPC7-AS1:2

Basic information

LNCipedia transcript ID: TRPC7-AS1:2 
HGNC Gene Symbol: TRPC7-AS1    
HGNC Full Gene Name: TRPC7 antisense RNA 1
Ensembl Gene ID: ENSG00000248211
Ensembl Transcript ID: ENST00000514459
Location (hg38): chr5:136214048-136222159
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 460 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000514459.1; TRPC7-AS1-001; OTTHUMT00000366974.1; NONHSAT103959
Alternative gene names: ENSG00000248211.1; TRPC7-AS1; OTTHUMG00000162034.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -148.2367 non-coding 
CPAT coding probability 14.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TRPC7-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SMAD5-1:1
4.0 TRPC7-AS1:2
4.1 TRPC7-AS1:2
5.0 TRPC7-AS1:2
5.1 TRPC7-AS1:2
5.2 TRPC7-AS1:2