Transcript: TTC21B-AS1:8

Basic information

LNCipedia transcript ID: TTC21B-AS1:8 
HGNC Gene Symbol: TTC21B-AS1    
HGNC Full Gene Name: TTC21B antisense RNA 1
Ensembl Gene ID: ENSG00000224490
Ensembl Transcript ID: ENST00000446624
Location (hg38): chr2:165933888-165947583
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 576 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000446624.1; AC010127.5-004; OTTHUMT00000333769.1; NONHSAT075268
Alternative gene names: ENSG00000224490.1; AC010127.5; OTTHUMG00000154082.1; TTC21B-AS1; ENSG00000224490.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -174.2603 non-coding 
CPAT coding probability 2.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TTC21B-AS1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CSRNP3-2:2
4.0 TTC21B-AS1:8
4.1 TTC21B-AS1:8
5.0 TTC21B-AS1:8
5.1 TTC21B-AS1:8
5.2 TTC21B-AS1:8