Transcript: TTC28-AS1:2

Basic information

LNCipedia transcript ID: TTC28-AS1:2 
LNCipedia gene ID: TTC28-AS1
Location (hg38): chr22:27919372-27924802
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2959 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA913:1
Alternative gene names: KIAA1648


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 22.8936 non-coding 
CPAT coding probability 0.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TTC28-AS1:2 yes no no no

Available literature

  1. Hirosawa (2001), Identification of novel transcribed sequences on human chromosome 22 by expressed sequence tag mapping., DNA Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 TTC28-AS1:2
4.1 TTC28-AS1:2
5.0 TTC28-AS1:2
5.1 TTC28-AS1:2
5.2 TTC28-AS1:2