Transcript: TTC3-AS1:1

Basic information

LNCipedia transcript ID: TTC3-AS1:1 
HGNC Gene Symbol: TTC3-AS1    
HGNC Full Gene Name: TTC3 antisense RNA 1
Ensembl Gene ID: ENSG00000228677
Ensembl Transcript ID: ENST00000424733
Location (hg38): chr21:37187666-37193926
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1097 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000424733.1; TTC3-AS1-001; OTTHUMT00000194806.1
Alternative gene names: ENSG00000228677.1; TTC3-AS1; OTTHUMG00000086658.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -23.878 non-coding 
CPAT coding probability 14.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TTC3-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DSCR3-1:1
4.0 TTC3-AS1:1
4.1 TTC3-AS1:1
5.0 TTC3-AS1:1
5.1 TTC3-AS1:1
5.2 TTC3-AS1:1