Transcript: TTTY2:4

Basic information

LNCipedia transcript ID: TTTY2:4 
HGNC Gene Symbol: TTTY2    
HGNC Full Gene Name: testis-specific transcript, Y-linked 2
Ensembl Gene ID: ENSG00000212855
Ensembl Transcript ID: ENST00000417072
Location (hg38): chrY:9740584-9758476
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3168 bp
Exons: 7
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00017611; ENST00000417072; ENST00000417072.1; TTTY2-001; OTTHUMT00000106565.1; NONHSAT139428
Alternative gene names: XLOC_008290; linc-USP9Y-6; ENSG00000212855; TTTY2; ENSG00000212855.5; OTTHUMG00000046230.1; TTY2; lINC00109


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 14.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TTTY2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TSPY10-2:3
3.1 lnc-TSPY10-2:3
4.0 TTTY2:4
4.1 TTTY2:4
5.0 TTTY2:4
5.1 TTTY2:4
5.2 TTTY2:4