Transcript: TTTY2B:3

Basic information

LNCipedia transcript ID: TTTY2B:3 
HGNC Gene Symbol: TTTY2B    
HGNC Full Gene Name: testis-specific transcript, Y-linked 2B
Ensembl Gene ID: ENSG00000212856
Ensembl Transcript ID: ENST00000450591
Location (hg38): chrY:6406244-6424145
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3168 bp
Exons: 7
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00017623; ENST00000450591; ENST00000450591.1; TTTY2B-001; OTTHUMT00000098348.1; NONHSAT139339
Alternative gene names: XLOC_008313; linc-SRY-3; ENSG00000212856; TTTY2B; ENSG00000212856.5; OTTHUMG00000040980.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.3702 non-coding 
CPAT coding probability 14.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TTTY2B:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AMELY-2:2
3.1 lnc-AMELY-2:2
4.0 TTTY2B:3
4.1 TTTY2B:3
5.0 TTTY2B:3
5.1 TTTY2B:3
5.2 TTTY2B:3