Transcript: TTTY5:2

Basic information

LNCipedia transcript ID: TTTY5:2 
HGNC Gene Symbol: TTTY5    
HGNC Full Gene Name: testis-specific transcript, Y-linked 5
Ensembl Gene ID: ENSG00000215560
Ensembl Transcript ID: ENST00000400581
Location (hg38): chrY:22296798-22298876
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1562 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000400581; ENST00000400581.2; TTTY5-001; OTTHUMT00000101917.1; NONHSAT139679; NR_001541
Alternative gene names: ENSG00000215560; TTTY5; ENSG00000215560.2; OTTHUMG00000043578.1; TTY5; LINC00126


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 24.7003 non-coding 
CPAT coding probability 6.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TTTY5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RBMY1F-1:2
3.1 lnc-RBMY1F-1:1
4.0 TTTY5:2
4.1 TTTY5:2
5.0 TTTY5:2
5.1 TTTY5:2
5.2 TTTY5:2