Transcript: TTTY9B:1

Basic information

LNCipedia transcript ID: TTTY9B:1 
LNCipedia gene ID: TTTY9B
Location (hg38): chrY:18582063-18629077
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2590 bp
Exons: 16
Sources: NONCODE v4
Alternative transcript names: NONHSAT139586
Alternative gene names: NCRNA00132


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 79.0785 coding 
CPAT coding probability 13.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
TTTY9B:1 no no no no

Available literature

  1. Skaletsky (2003), The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes., Nature


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HSFY2-2:3
4.0 TTTY9B:1
4.1 TTTY9B:1
5.0 TTTY9B:1
5.1 TTTY9B:1
5.2 TTTY9B:1