Transcript: TTTY9B:2

Basic information

LNCipedia transcript ID: TTTY9B:2 
HGNC Gene Symbol: TTTY9B    
HGNC Full Gene Name: testis-specific transcript, Y-linked 9B
Ensembl Gene ID: ENSG00000131007
Ensembl Transcript ID: ENST00000433794
Location (hg38): chrY:18581206-18590521
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1637 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000433794.1; TTTY9B-001; OTTHUMT00000100006.1; NONHSAT139585; NR_002159; NR_001530; ENST00000433794.5
Alternative gene names: ENSG00000131007.5; TTTY9B; OTTHUMG00000041950.1; ENSG00000131007.9; NCRNA00132


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.8453 non-coding 
CPAT coding probability 7.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TTTY9B:2 no no no no

Available literature

  1. Skaletsky (2003), The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes., Nature


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HSFY2-2:1
4.0 TTTY9B:2
4.1 TTTY9B:2
5.0 TTTY9B:2
5.1 TTTY9B:2
5.2 TTTY9B:2