Transcript: TUB-AS1:4

Basic information

LNCipedia transcript ID: TUB-AS1:4 
LNCipedia gene ID: TUB-AS1
RefSeq ID: NR_120538
Location (hg38): chr11:8060038-8069373
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1964 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120538; NR_120538.1
Alternative gene names: ; TUB-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -23.6314 non-coding 
CPAT coding probability 48.28% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
TUB-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EIF3F-1:4
4.0 TUB-AS1:4
4.1 TUB-AS1:4
5.0 TUB-AS1:4
5.1 TUB-AS1:4
5.2 TUB-AS1:4