Transcript: TUSC8:1

Basic information

LNCipedia transcript ID: TUSC8:1 
LNCipedia gene ID: TUSC8
Location (hg38): chr13:44400415-44410786
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2784 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT033506
Alternative gene names: XLOC_010588

RNA sequence:


Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -96.7508 non-coding 
CPAT coding probability 1.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TUSC8:1 no no no no

Available literature

  1. Liao (2014), Low expression of long noncoding XLOC_010588 indicates a poor prognosis and promotes proliferation through upregulation of c-Myc in cervical cancer., Gynecol. Oncol.

LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TSC22D1-1:6
4.0 TUSC8:1
4.1 TUSC8:1
5.0 TUSC8:1
5.1 TUSC8:1
5.2 TUSC8:1