Transcript: UBE2E2-AS1:3

Basic information

LNCipedia transcript ID: UBE2E2-AS1:3 
HGNC Gene Symbol: UBE2E2-AS1    
HGNC Full Gene Name: UBE2E2 antisense RNA 1 (head to head)
Ensembl Gene ID: ENSG00000233153
Ensembl Transcript ID: ENST00000430018
RefSeq ID: NR_136177
Location (hg38): chr3:23195070-23202578
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 499 bp
Exons: 2
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00005748; ENST00000430018.1; AC135966.1-003; OTTHUMT00000340884.1; NONHSAT088664; NR_136177.1
Alternative gene names: XLOC_003065; linc-ZNF385D-1; ENSG00000233153.1; AC135966.1; OTTHUMG00000155608.1; UBE2E2-AS1; ENSG00000233153.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -139.7718 non-coding 
CPAT coding probability 0.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
UBE2E2-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NKIRAS1-1:3
3.1 lnc-NKIRAS1-3:3
4.0 UBE2E2-AS1:3
4.1 UBE2E2-AS1:3
5.0 UBE2E2-AS1:3
5.1 UBE2E2-AS1:3
5.2 UBE2E2-AS1:3