Transcript: UCHL1-AS1:2

Basic information

LNCipedia transcript ID: UCHL1-AS1:2 
HGNC Gene Symbol: UCHL1-AS1    
HGNC Full Gene Name: UCHL1 antisense RNA 1 (head to head)
Ensembl Gene ID: ENSG00000251173
Ensembl Transcript ID: ENST00000510073
Location (hg38): chr4:41253883-41256721
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 451 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000510073.1; RP11-124A7.2-001; OTTHUMT00000360471.2; NONHSAT096160
Alternative gene names: ENSG00000251173.1; RP11-124A7.2; OTTHUMG00000160405.3; UCHL1-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -63.2242 non-coding 
CPAT coding probability 1.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
UCHL1-AS1:2 yes no no no

Available literature

  1. Zucchelli (2015), SINEUPs are modular antisense long non-coding RNAs that increase synthesis of target proteins in cells., Front Cell Neurosci


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-APBB2-1:2
4.0 UCHL1-AS1:2
4.1 UCHL1-AS1:2
5.0 UCHL1-AS1:2
5.1 UCHL1-AS1:2
5.2 UCHL1-AS1:2