Transcript: UCHL1-AS1:3

Basic information

LNCipedia transcript ID: UCHL1-AS1:3 
LNCipedia gene ID: UCHL1-AS1
Location (hg38): chr4:41220098-41221362
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 277 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008471; NONHSAT096159
Alternative gene names: XLOC_003934; linc-APBB2-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -104.4621 non-coding 
CPAT coding probability 2.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
UCHL1-AS1:3 no no no no

Available literature

  1. Zucchelli (2015), SINEUPs are modular antisense long non-coding RNAs that increase synthesis of target proteins in cells., Front Cell Neurosci


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-APBB2-1:1
3.1 lnc-APBB2-1:3
4.0 UCHL1-AS1:3
4.1 UCHL1-AS1:3
5.0 UCHL1-AS1:3
5.1 UCHL1-AS1:3
5.2 UCHL1-AS1:3