Transcript: UNC5B-AS1:3

Basic information

LNCipedia transcript ID: UNC5B-AS1:3 
LNCipedia gene ID: UNC5B-AS1
Location (hg38): chr10:71217224-71218212
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 613 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000447119.1; RP11-790G19.2-001; OTTHUMT00000048542.1; NONHSAT013875
Alternative gene names: ENSG00000237512.1; RP11-790G19.2; OTTHUMG00000018423.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -212.3216 non-coding 
CPAT coding probability 1.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
UNC5B-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCBD1-3:1
4.0 UNC5B-AS1:3
4.1 UNC5B-AS1:3
5.0 UNC5B-AS1:3
5.1 UNC5B-AS1:3
5.2 UNC5B-AS1:3